CDS

Accession Number TCMCG006C42209
gbkey CDS
Protein Id XP_013741929.1
Location complement(join(955448..955624,955692..955898,955980..956147,956637..957284))
Gene LOC106445002
GeneID 106445002
Organism Brassica napus

Protein

Length 399aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013886475.1
Definition UPF0187 protein At3g61320, chloroplastic isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description regulation of photosynthesis, light reaction
KEGG_TC 1.A.46.2
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K08994        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005216        [VIEW IN EMBL-EBI]
GO:0005244        [VIEW IN EMBL-EBI]
GO:0005247        [VIEW IN EMBL-EBI]
GO:0005253        [VIEW IN EMBL-EBI]
GO:0005254        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006821        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008308        [VIEW IN EMBL-EBI]
GO:0008509        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009533        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009668        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010027        [VIEW IN EMBL-EBI]
GO:0010109        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015103        [VIEW IN EMBL-EBI]
GO:0015108        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015698        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019684        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022832        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022838        [VIEW IN EMBL-EBI]
GO:0022839        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0042548        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043467        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098656        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098661        [VIEW IN EMBL-EBI]
GO:1902476        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACCAAGCCATGAATCTATCCCTTTCTTGCGAGTCACGGTTCCCTATATTCTCCACCTGTCCCCGCAAAACCCTCCATCTCAAGCCTCCACGCGTCTCCTCCGGCCCCGAACCAGGCGCCAAAACACTAACCGAGAACCTCATCTCCCTCCTCAGAGCGGTCCCTGACTGGGCAGACGAGATCAAAGAGCGCGGGATGCAGCAGAAACGAACTCTCTACACACACGAGAAATGGGTCGAACACAGAAGCTCTCTCCGCCACGTGCGTCACTTGGTCTCCTCCTTCTCTTCCCGCGTCATACTCTCTCTCATCCCTCCCGTCTTCTTCTTCACATCGGTGGCGGTTGTAATAGCAAGCTACAACTCCGCCGTGGCCTTGGAGTGGCTCCCTGGGATCTTCCCCATTCTGAGATCCTCCTCGCTGCCGTATCAGCTCACGGCTCCTGCTTTGGCTCTGCTTCTCGTGTTCCGCACGGAAGCTTCGTATTCTAGGTACGAGGAAGGGAGGAAAGCTTGGGTTAGGATCATTGCTGGAACTGATGATTTAGCTAGGCAAGTGATTTGTTCTGTTGATGGGTCTGGTGATGAGTTGGTTATTAAGGACTTGCTTCTTCGTTACATTGCAGCTTTCCCTGTGGCTCTTAAGTGTCATGTGATTTATGGTTCAGATATTGCAAGAGATCTCCGGAACTTGATAGAAGCAGATGACTTGTCTCTGATTCTTGAGTCTAAGCATCGTCCACGTTGTGTAATAGAGTTCATTTCTCAGAGCCTTCAGCTGCTGAAACTAGACGATACAAAGAGAGATTTGCTGGAATCAAAGATGTTGCATTTACATGAAGGTATTGGAGTGTGTGAACAGCTAATGGGCATTCCGATTCCTTTGTCTTACACACGCTTAACCTCGAGGTTTTTAGTCTTTTGGCATCTGACTCTCCCAATCATTCTCTGGGATGAGTGTCATTGGATTGTTGTTCCTGCTACTTTCATCAGTGCTGCTTCTCTCTTCTGCATAGAAGAAGTGGGTGTTCTTATAGAAGAGCCCTTTCCTATGTTGGCCTTAGACGAGCTTTGTGATCTTGTGCATAGTAACATCCAAGAAGCTGTTAAATCTGAGACAATCATACGTAACCGGATCATGGCAAAGATAAAGCTCCATGAGTTCAAGCACTCACCAAATGGTCGGCATAGATCTTGA
Protein:  
MYQAMNLSLSCESRFPIFSTCPRKTLHLKPPRVSSGPEPGAKTLTENLISLLRAVPDWADEIKERGMQQKRTLYTHEKWVEHRSSLRHVRHLVSSFSSRVILSLIPPVFFFTSVAVVIASYNSAVALEWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVRIIAGTDDLARQVICSVDGSGDELVIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDLSLILESKHRPRCVIEFISQSLQLLKLDDTKRDLLESKMLHLHEGIGVCEQLMGIPIPLSYTRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCDLVHSNIQEAVKSETIIRNRIMAKIKLHEFKHSPNGRHRS